Impact of DNA extraction on whole genome sequencing analysis for characterization and relatedness of Shiga toxin-producing Escherichia coli isolates

Nouws, StephanieStephanieNouwsBogaerts, BertBertBogaertsVerhaegen, BavoBavoVerhaegenDenayer, SarahSarahDenayerPierard, DenisDenisPierardMarchal, KathleenKathleenMarchalRoosens, Nancy H. C.Nancy H. C.RoosensVanneste, KevinKevinVannesteDe Keersmaecker, Sigrid C. J.Sigrid C. J.De Keersmaecker2021-12-142021-11-022021-12-1420202045-2322WOS:000608588500006https://imec-publications.be/handle/20.500.12860/38269Impact of DNA extraction on whole genome sequencing analysis for characterization and relatedness of Shiga toxin-producing Escherichia coli isolatesJournal article10.1038/s41598-020-71207-3WOS:000608588500006COMPLETE NUCLEOTIDE-SEQUENCEREAD ALIGNMENTOUTBREAK DETECTIONGENERATIONSTRAINSO157-H7IMPLEMENTATIONIDENTIFICATIONSURVEILLANCEVALIDATIONMEDLINE:32887913