Browsing by author "Fostier, Jan"
Now showing items 21-33 of 33
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GABAC: an arithmetic coding solution for genomic data
Voges, J.; Paridaens, Tom; Müntefering, F.; Mainzer, L.S.; Bliss, B.; Yang, M.; Ochoa, I.; Fostier, Jan; Ostermann, J.; Hernaez, M. (2020-04) -
Halvade somatic: Somatic variant calling with Apache Spark
Decap, Dries; Costanza, Pascal; De Schaetzen van Brienen, Louise; Larmuseau, Maarten; Herzeel, Charlotte; Wuyts, Roel; Marchal, Kathleen; Fostier, Jan (2022) -
Halvade-RNA: Parallel variant calling from transcriptomic data using MapReduce
Decap, Dries; Reumers, Joke; Herzeel, Charlotte; Costanza, Pascal; Fostier, Jan (2017-03) -
Halvade: scalable sequence analysis with MapReduce
Decap, Dries; Reumers, Joke; Herzeel, Charlotte; Costanza, Pascal; Fostier, Jan (2015) -
Illumina error correction near highly repetitive DNA regions improves de novo genome assembly
Heydari, Mahdi; Miclotte, Giles; Van de Peer, Yves; Fostier, Jan (2019-06) -
Improved Node and Arc Multiplicity Estimation in De Bruijn Graphs Using Approximate Inference in Conditional Random Fields
Steyaert, Aranka; Audenaert, Pieter; Fostier, Jan (2023) -
Multithreaded variant calling in elPrep 5
Herzeel, Charlotte; Costanza, Pascal; Decap, Dries; Fostier, Jan; Wuyts, Roel; Verachtert, Wilfried (2021) -
New parallel approaches for fast multipole solvers
Peeters, Joris; Fostier, Jan; Olyslager, Frank; De Zutter, Daniel (2007-11) -
OMSim: a simulator for optical map data
Miclotte, Giles; Plaisance, S.; Rombauts, S.; Van de Peer, Yves; Audenaert, Pieter; Fostier, Jan (2017-09) -
Oracle selection provides insight into how far off practice is from Utopia in plant breeding
Vanavermaete, David; Maenhout, Steven; Fostier, Jan; De Baets, Bernard (2023) -
Pan-genome de Bruijn graph using the bidirectional FM-index
Depuydt, Lore; Renders, Luca; Abeel, T; Fostier, Jan (2023) -
Performance analysis of a parallel, multi-node pipeline for DNA sequencing
Decap, Dries; Reumers, Joke; Herzeel, Charlotte; Costanza, Pascal; Fostier, Jan (2016) -
Preservation of genetic variation in a breeding population for long-term genetic gain
Vanavermaete, David; Fostier, Jan; Maenhout, S.; De Baets, Bernard (2020-08)