Browsing by author "Roosens, N.H.C."

A multiplex oligonucleotide ligation-PCR method for the genoserotyping of common Salmonella using a liquid bead suspension assay

Gand, M.; Mattheus, W.; Roosens, N.H.C.; Dierick, K.; Marchal, Kathleen; De Keersmaecker, S.C.J.; Bertrand, S. (2020)

A practical method to implement strain-level metagenomics-based foodborne outbreak investigation and source tracking in routine

Buytaers, F.E.; Saltykova, A.; Denayer, S.; Verhaegen, B.; Vanneste, K.; Roosens, N.H.C.; Piérard, D.; Marchal, Kathleen; De Keersmaecker, S.C.J. (2020)

Comparison of SNP-based subtyping workflows for bacterial isolates using WGS data, applied to Salmonella enterica serotype Typhimurium and serotype 1,4,[5], 12:i:-

Saltykova, Assia; Wuyts, Veronique; Mattheus, B.; Bertrand, S.; Roosens, N.H.C.; Marchal, Kathleen; De Keersmaecker, S.C.J. (2018-02)

Detailed evaluation of data analysis tools for subtyping of bacterial isolates based on whole genome sequencing: Neisseria meningitidis as a Proof of Concept

Saltykova, A.; Mattheus, W.; Bertrand, S.; Roosens, N.H.C.; Marchal, Kathleen; De Keersmaecker, S.C.J. (2019-12)

Development of an NGS-based workflow for improved monitoring of circulating plasmids in support of risk assessment of antimicrobial resistance gene dissemination

Berbers, B.; Ceyssens, P.-J.; Bogaerts, P.; Vanneste, K.; Roosens, N.H.C.; Marchal, Kathleen; De Keersmaecker, S.C.J. (2020)

First detection of a plasmid located carbapenem resistant blaVIM-1 gene in E.coli isolated from meat products at retail in Belgium in 2015

Garcia-Graells, C.; Berbers, Bas; Verhaegen, B.; Vanneste, Kevin; Marchal, Kathleen; Roosens, N.H.C.; Botteldoorn, N.; De Keersmaecker, S.C.J. (2020-07)

The benefits of whole genome sequencing for foodborne outbreak investigation from the perspective of a national reference laboratory in a smaller country

Nouws, S.; Bogaerts, B.; Verhaegen, B.; Denayer, S.; Crombé, F.; De Rauw, K.; Piérard, D.; Marchal, Kathleen; Vanneste, K.; Roosens, N.H.C.; De Keersmaecker, S.C.J. (2020)