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A semantic-based community model for high-fidelity tuning of olfactory mixture distances

 
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cris.virtual.orcid0000-0002-4884-9420
cris.virtual.orcid0000-0002-1093-7409
cris.virtual.orcid0000-0001-7843-2178
cris.virtual.orcid0000-0003-1453-1155
cris.virtual.orcid0000-0002-7111-8853
cris.virtualsource.department1818b505-f3d3-4102-86bb-f0b7724e974b
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cris.virtualsource.department35ec1bc6-a674-47e3-be5d-1bd685ff4449
cris.virtualsource.orcid1818b505-f3d3-4102-86bb-f0b7724e974b
cris.virtualsource.orcid149977c2-34fd-4c35-9b52-1f4249581a45
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cris.virtualsource.orcid35ec1bc6-a674-47e3-be5d-1bd685ff4449
dc.contributor.authorSatarifard, Vahid
dc.contributor.authorSisson, Laura
dc.contributor.authorHan, Yikun
dc.contributor.authorIlídio, Pedro
dc.contributor.authorHladiš, Matej
dc.contributor.authorLalis, Maxence
dc.contributor.authorSong, Xuebo
dc.contributor.authorYang, Tiffany
dc.contributor.authorYin, Wenjie
dc.contributor.authorRavia, Aharon
dc.contributor.authorZheng, CiCi Xingyu
dc.contributor.authorAndreoletti, Gaia
dc.contributor.authorAlbrecht, Jake
dc.contributor.authorPellegrino, Robert
dc.contributor.authorWang, Zehua
dc.contributor.authorYang, Stephen
dc.contributor.authorD’hondt, Robbe
dc.contributor.authorGhinis, Achilleas
dc.contributor.authorde Boer, Jasper
dc.contributor.authorNakano, Felipe Kenji
dc.date.accessioned2026-09-23T09:05:51Z
dc.date.available2026-09-23T09:05:51Z
dc.date.createdwos2026
dc.date.issued2026
dc.description.abstractA central goal in sensory science is to establish quantitative mappings between physical stimuli and perceptual experience. Although such mappings are well defined in vision and audition, they remain elusive in olfaction, particularly for complex odor mixtures. Here, we show that perceptual distances between odor mixtures can be predicted with high fidelity and are unexpectedly well captured by a compact semantic space derived from single-molecule representations. In the Dialogue for Reverse Engineering Assessment and Methods Olfactory Mixtures Prediction Challenge, we assembled a unified dataset of odor-mixture pairs, benchmarked predictions on a hidden test set of 46 pairs, and integrated the top-performing models into a postchallenge ensemble. This model outperformed existing state-of-the-art approaches on the hidden test set, reducing RMSE by about 33% to 0.08 and increasing Pearson correlation by 53% to 0.57, and maintained strong performance on an independent validation set of 50 newly designed mixture pairs. An ensemble, retaining only olfactory semantic features for each model included, further improved predictions, raising the Pearson correlation by 7% to 0.61 on the test set and by 15% to 0.54 on the validation set. Given that semantic features were extracted from pure molecules, it suggests that mixture perception may not require fundamentally different representational principles from single-molecule olfaction. Together, these results establish a reproducible quantitative framework for olfactory mixture perception and advance efforts to measure, model, and engineer smell.
dc.description.wosFundingTextThis research was supported in part by grants from the NIH (R01 DC017757), the NOMIS Foundation; Pershing Square Philanthropies; the Stavros Niarchos Foundation; Rothberg Catalyzer; Paul Graham Foundation; Schmidt Futures; European Research Council SynGrant 101118977 D2Smell; William R. Miller Fellowship; French National Research Agency (ANR) [ANR-19-CE07-0044] (PhD fellowship to M.H.); Fondation Roudnitska under the aegis of Fondation de France (PhD fellowship to M.L.); the Initiative of Excellence Universite Cote d'Azur under reference number ANR-15-IDEX-01; ChemSenSim Lab team is grateful to the Universite Cote d'Azur's Center for High-Performance Computing (Observatoire Pluridisciplinaire des Alpes-maritimes infrastructure) for providing resources and support; The belfaction team thanks the Flemish Government (AI Research Program) and Fonds Wetenschappelijk Onderzoek, 11A7U26N, 1235924N, and 1S38025N; The University of Michigan Computer Age Statistical Inference team acknowledges the support of a NINI (New Initiatives/New Instruction) grant from the College of Literature, Science, and the Arts at the University of Michigan. L.B.V. is supported by the HHMI.
dc.identifier.doi10.1073/pnas.2611057123
dc.identifier.eissn1091-6490
dc.identifier.issn0027-8424
dc.identifier.pmidMEDLINE:42550911
dc.identifier.urihttps://imec-publications.be/handle/20.500.12860/60468
dc.language.isoeng
dc.provenance.editstepusergreet.vanhoof@imec.be
dc.publisherNATL ACAD SCIENCES
dc.source.beginpagee2611057123
dc.source.issue32
dc.source.journalPROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
dc.source.numberofpages10
dc.source.volume123
dc.title

A semantic-based community model for high-fidelity tuning of olfactory mixture distances

dc.typeJournal article
dspace.entity.typePublication
imec.internal.crawledAt2026-08-05
imec.internal.sourcecrawler
imec.internal.wosCreatedAt2026-09-07
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