Publication:

Investigating fungal diversity through metabarcoding for environmental samples: assessment of ITS1 and ITS2 Illumina sequencing using multiple defined mock communities with different classification methods and reference databases

Date

2025-AUG 6
Journal article
https://doi.org/10.1186/s12864-025-11917-y
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dc.contributor.authorWinand, Raf
dc.contributor.authorD'hooge, Elizabet
dc.contributor.authorVan Uffelen, Alexander
dc.contributor.authorBogaerts, Bert
dc.contributor.authorVan Braekel, Julien
dc.contributor.authorHoffman, Stefan
dc.contributor.authorRoosens, Nancy H. C. J.
dc.contributor.authorBecker, Pierre
dc.contributor.authorDe Keersmaecker, Sigrid C. J.
dc.contributor.authorVanneste, Kevin
dc.contributor.imecauthorVan Uffelen, Alexander
dc.date.accessioned2025-08-15T03:57:03Z
dc.date.available2025-08-15T03:57:03Z
dc.date.issued2025-AUG 6
dc.description.wosFundingTextThis work was supported by the project 'NGS & Bioinformatics Platform' funded by Sciensano (Sciensano RP-PJ- Belgium).
dc.identifier.doi10.1186/s12864-025-11917-y
dc.identifier.issn1471-2164
dc.identifier.pmidMEDLINE:40770684
dc.identifier.urihttps://imec-publications.be/handle/20.500.12860/46079
dc.publisherBMC
dc.source.issue1
dc.source.journalBMC GENOMICS
dc.source.numberofpages22
dc.source.volume26
dc.subject.keywordsINTERNAL TRANSCRIBED SPACER
dc.subject.keywordsBAYESIAN CLASSIFIER
dc.subject.keywordsIDENTIFICATION
dc.subject.keywordsPENICILLIUM
dc.subject.keywordsASSIGNMENT
dc.subject.keywordsPHYLOGENY
dc.subject.keywordsREGION
dc.subject.keywordsBIASES
dc.subject.keywordsTOOL
dc.title

Investigating fungal diversity through metabarcoding for environmental samples: assessment of ITS1 and ITS2 Illumina sequencing using multiple defined mock communities with different classification methods and reference databases

dc.typeJournal article
dspace.entity.typePublication
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