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Neuropixels Opto: combining high-resolution electrophysiology and optogenetics

 
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cris.virtual.orcid0000-0001-6729-9391
cris.virtual.orcid0000-0002-0620-0033
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dc.contributor.authorLakunina, Anna A.
dc.contributor.authorSocha, Karolina Z.
dc.contributor.authorLadd, Alexander E.
dc.contributor.authorBowen, Anna J.
dc.contributor.authorChen, Susu
dc.contributor.authorColonell, Jennifer
dc.contributor.authorDoshi, Anjal
dc.contributor.authorKarsh, Bill
dc.contributor.authorKrumin, Michael
dc.contributor.authorKulik, Pavel
dc.contributor.authorLi, Anna J.
dc.contributor.authorNeutens, Pieter
dc.contributor.authorO'Callaghan, John
dc.contributor.authorOlsen, Meghan
dc.contributor.authorPutzeys, Jan
dc.contributor.authorBai Reddy, Charu
dc.contributor.authorTilmans, Harrie A. C.
dc.contributor.authorVargas, Sara
dc.contributor.authorWelkenhuysen, Marleen
dc.contributor.authorYe, Zhiwen
dc.date.accessioned2026-09-02T09:11:43Z
dc.date.available2026-09-02T09:11:43Z
dc.date.createdwos2026
dc.date.issued2026
dc.description.abstractHigh-resolution extracellular electrophysiology is the gold standard for recording spikes from distributed neural populations and is especially powerful when combined with optogenetics for manipulation of specific cell types with high temporal resolution. We integrated these approaches into prototype Neuropixels Opto probes, which combine electronic and photonic circuits. These devices pack 960 electrical recording sites and two sets of 14 light emitters onto a 70-μm-wide, 1-cm-long shank, allowing spatially addressable optogenetic stimulation with blue and red light. In mouse cortex, Neuropixels Opto probes delivered high-quality recordings together with spatially addressable optogenetics, differentially activating or silencing neurons at distinct cortical depths. In the mouse striatum and other deep structures, Neuropixels Opto probes delivered efficient optotagging, facilitating the identification of two cell types in parallel. Neuropixels Opto probes represent a promising tool for recording, identifying and manipulating neuronal populations.
dc.description.wosFundingTextWe thank numerous colleagues who contributed to this project. At IMEC, E. Tonon contributed invaluable assistance. At University College London, B. Terry and M. Robacha assisted with colony management and brain sectioning. At University of Washington, L. Kolich and K. Miller assisted with mouse husbandry. At the Allen Institute, the Allen Institute Transgenic Colony Management, Lab Animal Services, Neurosurgery and Behavior Team and Viral Core provided invaluable assistance, X. Opitz-Araya managed cloning of viral vectors and A. Buccino helped with spike sorting pipelines. At HHMI, J. Macklin provided advice on optical phantoms. This research was funded by the Wellcome Trust (grants 204915/Z/16/Z to M.C., M.H. and T.D.H. and 225819/Z/22/Z to M.C., M.H. and N.A.S.), the HHMI (T.D.H.), the BRAIN Initiative (U01NS133760 to J.H.S. and K.S.; UF1MH128339 to J.T.), the Paul G Allen Family Foundation (C.K., J.H.S. and K.S.), the Research Council of Norway (NORBRAIN 350201 to Edvard Moser), the Pew Biomedical Scholars Program (N.A.S.) and the Klingenstein-Simons Fellowship in Neuroscience (N.A.S.). M.C. holds the GlaxoSmithKline/Fight for Sight Chair in Visual Neuroscience.
dc.identifier.doi10.1038/s41592-026-03076-z
dc.identifier.issn1548-7091
dc.identifier.pmidMEDLINE:42225964
dc.identifier.urihttps://imec-publications.be/handle/20.500.12860/60181
dc.language.isoeng
dc.provenance.editstepusergreet.vanhoof@imec.be
dc.publisherNATURE PORTFOLIO
dc.source.beginpage1207
dc.source.endpage1216
dc.source.issue6
dc.source.journalNATURE METHODS
dc.source.numberofpages32
dc.source.volume23
dc.subject.keywordsINTEGRATED OPTICAL-FIBERS
dc.subject.keywordsSILICON PROBES
dc.subject.keywordsNEURAL CIRCUITS
dc.subject.keywordsNEURONS
dc.subject.keywordsLIGHT
dc.subject.keywordsCORTEX
dc.subject.keywordsCELLS
dc.subject.keywordsCHANNELRHODOPSIN-2
dc.subject.keywordsINTERNEURONS
dc.subject.keywordsACTIVATION
dc.title

Neuropixels Opto: combining high-resolution electrophysiology and optogenetics

dc.typeJournal article
dspace.entity.typePublication
imec.internal.crawledAt2026-07-14
imec.internal.sourcecrawler
imec.internal.wosCreatedAt2026-07-14
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